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My understanding is that by decreasing costs you mean not running FSx as a hot standby, correct? Unfortunately, Importing data to S3 (either through File Gateway or Datasync) will invalidate all NTFS metadata. And although you might be able to develop a programmatic way of restoring the data to FSx from S3, you will definitely lose your NTFS permissions. It is possible to preserve the metadata by archiving files into WinRAR but WinRAR might have limitations on archive size and will likely complicate the recovery process.
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