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Can you please check the status of versioning to see its showing suspended , if it is then versioning was enabled and then suspended.. There is an option within S3 bucket where you can see hidden files , you just have to check show versions and you will be able to see if there are version files or not. Also you can check the storage lens to get deep detail of your objects.
If you see versioned objects then have lifecycle policy to move them or expire them as per requirement.
Looping back to provide the answer to this issue. The hidden files ended up being years of "Incomplete multipart upload bytes greater than 7 days". This was caused by our Internet connection sometimes dropping during the upload of files to the buckets. We set up a lifecycle rule in the bucket to clean this up.
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AWS OFFICIALUpdated 3 years ago
Thank you for your suggestions. I checked the buckets and all were set to Disabled on Versioning and there was no toggle for Show Versions. I have gone back to the Storage Lens and all the default lens shows me is that we have 21TB of data in S3 Std, no information about what files are in that storage class. I have created a custom lens with the advanced features enabled and now I have to wait 48 hours for it to populate with data. I will update this once I have information in the new custom storage lens. Please let me know if you have any further suggestions.