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You're about half way there, now you need to create the dynamic part of your site.
You will want to create an API Gateway with endpoints backed by Lambda functions. You can then call the API Gateway endpoints from the HTML/JS hosted in your S3 bucket to retrieve information from your MySQL database. I would also recommend putting CloudFront in front of your S3 hosted website to provide caching of your HTML/JS/CSS files as well as saving some potential cost on S3 data transfer.
Here's some great information about getting started with API Gateway and Lambda functions: https://docs.aws.amazon.com/apigateway/latest/developerguide/getting-started-with-lambda-integration.html
Also here's some great documentation about how to connect Lambda to RDS: https://docs.aws.amazon.com/lambda/latest/dg/services-rds-tutorial.html
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